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OpenMS
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Generates an assay library using DDA data (Metabolomics)
potential predecessor tools | → AssayGeneratorMetabo → | potential successor tools |
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FeatureFinderMetabo | OpenSWATH pipeline | |
AccurateMassSearch |
Build an assay library from DDA data (MS and MS/MS) (mzML). Please provide a list of features found in the data (featureXML).
Features can be detected using the FeatureFinderMetabo (FFM) and identifcation information can be added using the AccurateMassSearch featureXML output.
If the FeatureFinderMetabo featureXML does not contain any identifications the "use_known_unknowns" flag is used automatically.
Internal procedure AssayGeneratorMetabo:
The command line parameters of this tool are:
INI file documentation of this tool: